dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01600
Location and strand information: 10224 - 11933 (+)
Family: GH18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.0937
Protein molecular weight: 64369.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01601
Location and strand information: 12580 - 13833 (-)
Family: 3.A.1.122.2
Protein type: TC
Protein description: putative ABC transporter permease YknZ

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01602
Location and strand information: 13848 - 15425 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01603
Location and strand information: 15397 - 16104 (-)
Family: 3.A.1.122.2
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YknY

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01604
Location and strand information: 16101 - 17309 (-)
Family: null
Protein type: null
Protein description: Putative efflux system component YknX

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01605
Location and strand information: 17862 - 21017 (+)
Family: null
Protein type: null
Protein description: mupirocin-resistant isoleucine--tRNA ligase MupB

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01606
Location and strand information: 21045 - 23540 (+)
Family: GT35
Protein type: CAZyme
Protein description: Glycogen phosphorylase
Protein isoelectric point: 5.2449
Protein molecular weight: 96204.42
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01607
Location and strand information: 23620 - 24528 (-)
Family: HisKA+HATPase_c
Protein type: STP
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01608
Location and strand information: 24544 - 25368 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002974_24|CGC1
Gene ID: MGYG000002974_01609
Location and strand information: 25361 - 26275 (-)
Family: 3.A.1.131.1
Protein type: TC
Protein description: putative multidrug ABC transporter ATP-binding protein YbhF

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002974_01600	hypothetical protein	CAZyme	10224	11933	+	GH18
MGYG000002974_01601	putative ABC transporter permease YknZ	TC	12580	13833	-	3.A.1.122.2
MGYG000002974_01602	hypothetical protein	null	13848	15425	-	No domain
MGYG000002974_01603	putative ABC transporter ATP-binding protein YknY	TC	15397	16104	-	3.A.1.122.2
MGYG000002974_01604	Putative efflux system component YknX	null	16101	17309	-	HlyD_D23
MGYG000002974_01605	mupirocin-resistant isoleucine--tRNA ligase MupB	null	17862	21017	+	tRNA-synt_1\| Anticodon_1\| DUF5915
MGYG000002974_01606	Glycogen phosphorylase	CAZyme	21045	23540	+	GT35
MGYG000002974_01607	Sensor histidine kinase RcsC	STP	23620	24528	-	HisKA\| HATPase_c
MGYG000002974_01608	hypothetical protein	null	24544	25368	-	ABC2_membrane_2
MGYG000002974_01609	putative multidrug ABC transporter ATP-binding protein YbhF	TC	25361	26275	-	3.A.1.131.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature